Dr. Monica Tischler

Office: Birk 333
Phone: 630-829-6536
Office Hours: MWF 8:00 - 9:00 am; 11:00 - 12:00 am; and by appointment

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 BIOL 208 -- General Microbiology with Lab
Fall 2001

MWF 9:00-9:50

Th 8:30-11:30 or 1:30-4:30


BIOL 208: Microbiology
Syllabus

Texts and Micro Links
Lecture Schedule
Prerequisites and Policies
Course Objectives
Lab Schedule
Exams and Grading Policies


Required Course Texts:

Madigan, M., J. Martinko, and J. Parker. 2000. Brock: Biology of Microorganisms. Ninth Edition. Prentice Hall, Upper Saddle River, NJ.

Seeley, H.W., Jr., P.J. Van Demark, and J.J. Lee. 1991. Microbes in Action: A Laboratory Manual of Microbiology. W.H. Freeman and Company, New York.

Some useful microbiology sites:

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Course Schedule:


Day
Date Topic Text Chapter

M

8/27

Introduction -- What is microbiology?

Ch. 1.1-1.7

W

8/29

History and microbiological tools

Ch. 1.8-1.9

F

8/31

History and microbiological tools

Ch. 3.1-3.3

M

9/3

No class -- Labor Day

 

W

9/5

Cell structure and function

Ch. 3

F

9/7

Cell structure and function

Ch. 3

M

9/10

How to grow microorganisms

Ch. 5

W

9/12

How to grow microorganisms

Ch. 5

F

9/14

How to kill microorganisms

Ch. 18

M

9/17

Characterization of microorganisms

Ch. 12

W

9/19

Characterization of microorganisms

Ch. 12

F

9/21

Microbial metabolism

Ch. 4

M

9/24

Exam #1

 

W

9/26

Microbial metabolism

Ch. 4

F

9/28

Microbial metabolism

Ch. 15

M

10/1

Microbial metabolism

Ch. 15

W

10/3

Microbial metabolism

Ch. 7

F

10/5

Microbial genetics

Ch. 9

M

10/8

Microbial genetics

Ch. 9

W

10/10

Genetic engineering and biotechnology

Ch.10

F

10/12

No class -- Fall Break

 

M

10/15

Genetic engineering and biotechnology

Ch. 10

W

10/17

Industrial microbiology and biotechnology

Ch. 11

F

10/19

Exam #2

 

M

10/22

Food microbiology

Ch. 11

W

10/24

Viruses

Ch. 8

F

10/26

Viruses

Ch. 8

M

10/29

Normal flora

Ch. 19

W

10/31

Pathogenesis

Ch. 19

F

11/2

Pathogenesis

Ch. 19

M

11/5

Immunology

Ch. 20

W

11/7

Immunology

Ch. 20

F

11/9

Clinical and diagnostic microbiology

Ch. 21

M

11/12

Epidemiology and public health

Ch. 22

W

11/14

Microbial disease

Ch. 23-24

F

11/16

Exam #3

 

M

11/19

Microbial disease

Ch. 23-24

W

11/21

No class -- Thanksgiving week

 

F

11/23

No class -- Thanksgiving week

 

M

11/26

Microbial disease

Ch. 23-24

W

11/28

Microbial disease

Ch. 23-24

F

11/30

Microbial disease

Ch. 23-24

M

12/3

Microbial ecology

Ch. 16

W

12/5

Microbial ecology

Ch. 16

F

12/7

Microbial ecology

Ch. 16



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Course times:

Lecture MWF 9:00 - 9:50, Birk 225
Laboratory Thurs 8:30 - 11:30, OR
    Thurs 1:30 - 4:30,
You MUST attend the laboratory in which you are enrolled.


Course Objectives:

The course is a comprehensive survey of the biology of microorganisms including microbes as cellular systems, as energy-transducers, as tools for the study of living processes, as agents of environmental and geochemical change, as agents of infectious disease, as industrial and biotechnological tools, and microbial diversity. This course covers both prokaryotic and eukaryotic microorganisms, as well as basic virology.



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Prerequisites and Policies

Course prerequisites:
Biology, Health Science, and Molecular Biology majors must have taken BIOL 108/109. Other majors must have taken BIOL 108/109 or have consent of the instructor.

Other Information:
If you have a documented learning, psychological, or physical disability, you may be eligible for reasonable academic accommodations or services. To request accommodations or services, contact the Academic Resource Center in Kindlon Hall, Room 249. All students are expected to fulfill essential course requirements. The University will not waive any essential skill or requirement of a course or degree program.

Attendance Policy:
Attendance at lectures is expected; attendance at all exams is required. Attendance will be taken, and it is in the student's best interest to attend class. Each student will be allowed 6 absences from class. Excessive absences will result in the reduction of that student's final, cumulative grade by one letter grade. Students having difficulty meeting the attendance requirement should speak to Dr. Tischler as soon as the problem arises. Absence at exams will result in a grade of zero for that exam unless arrangements are made with the instructor at least one day prior to the day of the exam.

Course Drop Date:
The last day to drop a course at Benedictine U. is Nov. 2.

Academic Honesty Policy:
All students are required to read and abide by the Honesty Statement in the Student Handbook. Any instance of an activity that constitutes cheating as outlined in the statement of Academic Policy in the Student Handbook will result in a grade of F for this course. Plagiarism (using someone's ideas, not just exact words, without crediting that person) is considered cheating. Any instance of cheating will be reported to the Dean of Students, the student's advisor, and the Health Sciences Recommendation Committee.

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Lab Rules:
  1. Attendance at labs is mandatory.
  2. A paper or lab report will not be accepted for labs from which a student is absent.
  3. Laboratory coats are required. hair longer than shoulder-length must be pulled back.
  4. No smoking, eating, or drinking in the lab.
  5. You are required to read all assigned exercises before coming to class.


Lab Schedule

Lab Period
Exercise Description Exercise No.

8/30

Check in and introduction

Use of the microscope

Simple staining

Broth culture

Streak plate#

pg. x

1

12

7

9

9/6

Broth culture (cont)

Streak plate (cont)

Microbial flora of the oral cavity

Gram stain#

Demonstration of phase contrast microscopy

Pipetting and dilution of dye

7

9

3

13

4

16

9/13

Gram stain (cont)

Applied microbiology of foods

beer, pickles

enrichment of Lactobacillus from yogurt

Turbidometric estimation of bacterial growth*

13

handout

60

46

19

9/20

Applied microbiology (cont)

Gram stain of pickle cultures

Gram stain of yogurt enrichments, isolation

Bacterial growth (cont)

Degradation of carbohydrates

Degradation of proteins and amino acids

Urea hydrolysis

bring in soil sample for next class period

handout

46

19

35

36

37

9/27

No class -- study for your other classes

 

10/4

Confirmation of yogurt isolate

Degradation of carbohydrates (cont)

Degradation of proteins and amino acids (cont)

Urea hydrolysis (cont)

Respiratory enzymes

Endospore stain

Acid-fast stain

Soil enrichments

Bacillus isolation*

Pseudomonad isolation*

Isolation of an anaerobe*

Isolation of an antibiotic producer*

46

35

36

37

38

14

handout

43

44

handout

33

10/11

Lab quiz

Soil enrichments (cont)

Bacillus isolation*

Pseudomonad isolation*

Isolation of an anaerobe*

Isolation of an antibiotic producer*

Effect of temperature on growth

bring in disinfectant for next class

 

43

44

handout

33

20

10/18

Soil enrichments (cont)

Effect of temperature on growth (cont)

Antiseptic and disinfectant action

Isolation of Staphylococcus

Isolation of Streptococcus

Kirby-Bauer technique for antibiotic action

20

30

45

70

71

10/25

Soil enrichments (cont)

Antiseptic and disinfectant action (cont)

Staphylococcus isolation (cont)

Streptococcus isolation (cont)

Kirby-Bauer (cont)

Microbial Analysis of food*

30

45

70

71

handout

11/1

Soil enrichments (cont)

Antibiotic action (cont)

Staphylococcus isolation (cont)

Streptococcus isolation (cont)

Microbial analysis of food (cont)

Unknowns*

71

45

70

handout

11/8

Unknowns

 

11/15

Unknowns

 

11/22

No class -- Thanksgiving Day

Eat turkey and watch parades and football games

 

11/29

Unknowns

handout

12/6

Final lab quiz

Applied Microbiology

finish up unknowns

Check-out

 
#lab skill; *lab write-up



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Examinations and Grading:

Examinations:
All exams will be a combination of objective questions (multiple choice, fill in the blank, labeling diagrams, matching, etc.), short answer, and essay questions. Exams will be primarily over lecture material; however students are responsible for material in the textbook if the topic was covered in lecture. Since the lectures will correspond largely to material in the book, it is in the best interest of the student to read the text.

Final Exam:
The final exam will be comprehensive and will cover both lecture and laboratory material.

Laboratory Pop Quizzes:
Pop quizzes may cover both

  1. the readings from the lab manual due that week, and
  2. the readings or techniques or procedures covered since the last pop quiz or lab quiz.

Be assured that there will be pop quizzes if it appears that students are not coming to lab prepared.

Practical Skills:
There will be no formal "lab practical" exams in this class. However, students are expected to master certain basic microbiology laboratory skills. Each student will have to demonstrate to the instructor the mastery of those skills before the end of the semester.

Basis of Grading:
Assignment
DatePoints
Exam #1 9/24 100
Exam #2 10/19 100
Exam #3 11/16 100
Final Exam Friday, 12/14; 10:15 am 200
Lab Quiz #1 10/11 30
Final Lab Quiz 12/6 30
Lab assignments, pop quizzes . 30
Practical lab skills . 15
Unknowns . 25
lab attendance, courtesy, and cooperation . 20
Total . 650



Grades will be assigned on the following basis:

Percentage Grade
90-100% A
80-89% B
70-79% C
60-69% D
below 60% F



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This page was last updated on August 24, 2001 by M. Tischler.